Recent Publications

Plants in the greenhouse.

May-August

  1. Bai, G., Y. Ge, B. Leavitt, J. A. Gamon and D. Scoby (2023). "Goniometer in the air: Enabling BRDF measurement of crop canopies using a cable-suspended plant phenotyping platform." Biosystems Engineering 230: 344-360.
  2. Barnes, A. C., J. L. Myers, S. M. Surber, Z. Liang, J. P. Mower, J. C. Schnable and R. L. Roston (2023). "Oligogalactolipid production during cold challenge is conserved in early diverging lineages." Journal of Experimental Botany.
  3. Bi, Y., R. M. Yassue, P. Paul, B. K. Dhatt, J. Sandhu, P. T. Do, H. Walia, T. Obata and G. Morota (2023). "Evaluating metabolic and genomic data for predicting grain traits under high night temperature stress in rice." G3 (Bethesda) 13(5).
  4. Chen, J., Z. Wang, K. Tan, W. Huang, J. Shi, T. Li, J. Hu, K. Wang, C. Wang, B. Xin, H. Zhao, W. Song, M. B. Hufford, J. C. Schnable, W. Jin and J. Lai (2023). "A complete telomere-to-telomere assembly of the maize genome." Nature Genetics.
  5. DeLong, J. P., J. L. Van Etten and D. D. Dunigan (2023). "Lessons from Chloroviruses: the Complex and Diverse Roles of Viruses in Food Webs." J Virol 97(5): e0027523.
  6. Esmael, A., I. V. Agarkova, D. D. Dunigan, Y. Zhou and J. L. Van Etten (2023). "Viral DNA Accumulation Regulates Replication Efficiency of Chlorovirus OSy-NE5 in Two Closely Related Chlorella variabilis Strains." Viruses 15(6).
  7. Głowacka, K., J. Kromdijk, C. E. Salesse-Smith, C. Smith, S. M. Driever and S. P. Long "Is chloroplast size optimal for photosynthetic efficiency?" New Phytologist.
  8. Hao, J., Y. Yang, S. Futrell, E. A. Kelly, C. M. Lorts, B. Nebie, S. Runo, J. Yang, S. Alvarez, J. R. Lasky and D. P. Schachtman "CRISPR/Cas9-Mediated Mutagenesis of Carotenoid Cleavage Dioxygenase (CCD) Genes in Sorghum Alters Strigolactone Biosynthesis and Plant Biotic Interactions." Phytobiomes Journal 0(0): PBIOMES-08-22-0053-R.
    1. Hartwig, T., M. Banf, G. P. Prietsch, J.-Y. Zhu, I. Mora-Ramírez, J. H. M. Schippers, S. J. Snodgrass, A. S. Seetharam, B. Huettel, J. M. Kolkman, J. Yang, J. Engelhorn and Z.-Y. Wang (2023). "Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize." Genome Biology 24(1): 108.
    2. Katimbo, A., D. R. Rudnick, J. Zhang, Y. Ge, K. C. DeJonge, T. E. Franz, Y. Shi, W.-z. Liang, X. Qiao, D. M. Heeren, I. Kabenge, H. N. Nakabuye and J. Duan (2023). "Evaluation of artificial intelligence algorithms with sensor data assimilation in estimating crop evapotranspiration and crop water stress index for irrigation water management." Smart Agricultural Technology 4: 100176.
    3. Konda, A. R., M. Gelli, C. Pedersen, R. E. Cahoon, C. Zhang, T. Obata and E. B. Cahoon (2023). "Vitamin E biofortification: Maximizing oilseed tocotrienol and total vitamin E tocochromanol production by use of metabolic bypass combinations." Metabolic Engineering 79: 66-77.
    4. Li, J., Y. Ge, L. Puntel, D. Heeren, G. Balboa and Y. Shi (2023). Combining machine learning with a mechanistic model to estimate maize nitrogen content from UAV-acquired hyperspectral imagery. Autonomous Air and Ground Sensing Systems for Agricultural Optimization and Phenotyping VIII, SPIE.
    5. Li, J., Y. Su, C. A. Shapiro, D. P. Schachtman and X. Wang (2023). "Phosphate deficiency modifies lipid composition and seed oil production in camelina." Plant Science 330: 111636.
    6. Lima, D. C., A. C. Aviles, R. T. Alpers, B. A. McFarland, S. Kaeppler, D. Ertl, M. C. Romay, J. L. Gage, J. Holland, T. Beissinger, M. Bohn, E. Buckler, J. Edwards, S. Flint-Garcia, C. N. Hirsch, E. Hood, D. C. Hooker, J. E. Knoll, J. M. Kolkman, S. Liu, J. McKay, R. Minyo, D. E. Moreta, S. C. Murray, R. Nelson, J. C. Schnable, R. S. Sekhon, M. P. Singh, P. Thomison, A. Thompson, M. Tuinstra, J. Wallace, J. D. Washburn, T. Weldekidan, R. J. Wisser, W. Xu and N. de Leon (2023). "2018–2019 field seasons of the Maize Genomes to Fields (G2F) G x E project." BMC Genomic Data 24(1): 29.
    7. Lopes, L. D. and D. P. Schachtman (2023). "Rhizosphere and bulk soil bacterial community succession is influenced more by changes in soil properties than in rhizosphere metabolites across a maize growing season." Applied Soil Ecology 189: 104960.
    8. Luo, M., T. J. Sarnowski, M. Libault, G. Rios, J. B. Charron, N. Mantri and S. D. Zhang (2023). "Editorial: New insights into mechanisms of epigenetic modifiers in plant growth and development, volume II." Frontiers in Plant Science 14.
    9. Nan, Y., H. Zhang, Y. Zeng, J. Zheng and Y. Ge (2023). "Intelligent detection of Multi-Class pitaya fruits in target picking row based on WGB-YOLO network." Computers and Electronics in Agriculture 208: 107780.
    10. Sahay, S., M. Grzybowski, J. C. Schnable and K. Głowacka (2023). "Genetic control of photoprotection and photosystem II operating efficiency in plants." New Phytologist 239(3): 1068-1082.
    11. Xie, X., Y. Ge, H. Walia, J. Yang and H. Yu (2023). "Leaf-Counting in Monocot Plants Using Deep Regression Models." Sensors (Basel) 23(4).
    12. Zhang, J., K. Thapa, N. Chamara, G. Bai and Y. Ge (2023). Estimating crop stomatal conductance from RGB, NIR, and thermal infrared images. Autonomous Air and Ground Sensing Systems for Agricultural Optimization and Phenotyping VIII, SPIE.